Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397274.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_228.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2969030

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 846 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2955555--2955587
14
2.4
14
90
5
50
45
0
0
54
0.99
2958033--2958109
21
3.7
21
89
0
118
22
18
25
33
1.96
2958033--2958113
42
2.0
41
95
2
144
23
17
24
34
1.96
2958097--2958163
24
2.5
28
76
11
70
38
20
11
28
1.88
2959984--2960022
18
2.1
19
86
13
55
46
0
5
48
1.24
2963213--2963248
2
18.0
2
94
0
63
0
47
0
52
1.00

Tables:   1   2   3   4   5   6   7   8

The End!