Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000422.1 Hibiscus syriacus cultivar Beakdansim tig00000773_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2457469

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   

This is table  12  of  12  ( 1325 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2422775--2423558
389
2.0
389
99
0
1559
31
24
15
28
1.95
2427355--2427438
20
4.2
20
81
0
96
42
19
14
23
1.87
2435765--2435797
13
2.6
13
90
4
50
54
0
0
45
0.99
2449397--2449431
18
1.9
18
100
0
70
31
17
5
45
1.71
2457029--2457072
20
2.2
20
84
4
54
38
0
22
38
1.55

Tables:   1   2   3   4   5   6   7   8   9   10   11   12

The End!