Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005983.1 Hibiscus syriacus cultivar Beakdansim tig00014064_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  781742

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 495 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
780685--780780
14
6.9
14
76
8
79
12
3
27
57
1.50
780785--780864
21
3.8
21
75
3
72
18
8
22
50
1.74
780819--780892
28
2.6
28
84
0
76
16
10
22
50
1.76
780812--780921
7
15.7
7
72
0
58
13
10
24
50
1.73
780812--781018
49
4.2
49
79
1
200
13
9
24
52
1.70
780847--780920
21
3.5
21
71
0
67
9
12
27
51
1.70
780838--780892
28
2.0
28
92
0
92
16
12
25
45
1.83
780903--780963
21
2.9
21
78
9
70
9
8
24
57
1.58
780986--781026
14
2.9
14
88
0
64
12
9
26
51
1.70
781091--781151
28
2.1
29
84
3
79
14
8
24
52
1.69
781091--781158
28
2.4
28
82
2
73
14
10
23
51
1.73
781176--781215
13
3.0
13
85
7
53
0
20
55
25
1.44
781177--781402
7
34.7
7
89
9
297
0
28
54
16
1.42
781197--781402
13
15.9
13
89
9
268
0
30
54
15
1.41
781400--781740
7
50.4
7
93
5
400
14
6
42
36
1.72

Tables:   1   2   3   4   5

The End!