Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007428.1 Hibiscus syriacus cultivar Beakdansim tig00020138_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  917797

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 493 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
868384--868418
10
3.5
10
92
7
54
91
0
8
0
0.42
868384--868419
16
2.2
16
95
0
63
91
0
8
0
0.41
872437--872466
6
5.0
6
91
0
51
36
0
46
16
1.47
873102--873166
31
2.1
30
83
8
78
24
9
6
60
1.50
881683--881801
30
3.9
31
74
17
106
40
6
5
47
1.54
881696--881801
31
3.4
31
78
12
112
41
6
6
45
1.56
881730--881785
15
3.7
15
76
13
53
39
5
3
51
1.42
882295--882339
22
2.0
22
83
8
56
44
0
4
51
1.21
885793--885851
31
1.9
31
83
16
79
32
8
25
33
1.86
893890--893982
31
3.0
31
76
16
93
40
8
11
38
1.73
903715--903772
21
2.8
21
91
0
98
34
20
25
18
1.96
909657--909709
21
2.5
21
84
0
79
49
22
13
15
1.79
912603--912779
90
2.0
89
94
1
309
45
6
10
37
1.64

Tables:   1   2   3   4   5

The End!