Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007943.1 Hibiscus syriacus cultivar Beakdansim tig00110365_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1187827

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 611 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1173744--1173800
25
2.3
25
85
11
73
26
5
1
66
1.22
1175781--1176227
229
2.0
225
94
1
777
45
8
7
39
1.61
1176457--1176503
20
2.4
19
79
10
58
55
8
17
19
1.67
1178815--1178880
33
2.0
33
87
0
96
28
1
45
24
1.62
1180669--1180730
18
3.4
19
91
6
101
32
3
9
54
1.49
1180811--1181826
397
2.6
396
94
1
1790
36
14
15
33
1.88
1180811--1181826
197
5.1
197
96
1
1772
36
14
15
33
1.88
1183307--1183353
18
2.6
18
93
0
85
38
4
34
23
1.74
1183307--1183357
3
17.0
3
83
0
66
37
3
33
25
1.74
1183295--1183357
12
5.2
12
90
0
81
36
6
33
23
1.80
1184717--1185369
181
3.7
182
94
4
1113
35
14
15
33
1.88

Tables:   1   2   3   4   5   6

The End!