Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008000.1 Hibiscus syriacus cultivar Beakdansim tig00110457_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1646480

Tables:   1   2   3   4   5   6   7   8   9   

This is table  9  of  9  ( 964 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1625332--1625495
88
1.9
88
93
0
283
32
14
9
42
1.79
1631569--1631600
15
2.1
16
88
11
50
28
9
21
40
1.84
1635208--1635774
105
5.4
105
93
1
904
23
17
25
33
1.96
1636522--1636613
45
2.0
46
82
4
114
14
26
14
45
1.82

Tables:   1   2   3   4   5   6   7   8   9

The End!