Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008099.1 Hibiscus syriacus cultivar Beakdansim tig00110627_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  767286

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 496 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
756007--756078
37
2.0
36
91
5
119
47
15
5
31
1.68
756012--756098
35
2.4
36
84
5
106
42
16
9
32
1.79
758646--758700
2
27.5
2
100
0
110
50
0
0
49
1.00
759294--759391
31
3.0
31
79
7
97
33
10
10
45
1.72
762063--762170
7
15.4
7
72
3
65
25
0
27
47
1.52
762041--762200
42
3.8
41
75
8
144
26
0
26
46
1.53
762063--762179
28
4.1
27
70
17
78
25
0
27
47
1.53
762105--762214
14
7.8
14
71
15
57
24
0
27
48
1.52
762084--762256
28
6.1
29
70
12
101
26
0
25
47
1.56
762128--762284
57
2.8
56
80
5
190
24
0
28
46
1.57
762100--762214
21
5.4
21
71
10
81
25
0
27
46
1.53
764184--764216
12
2.8
12
95
0
57
33
27
18
21
1.96
764276--764335
29
2.1
29
90
0
93
21
13
21
43
1.87
765294--765655
20
18.2
20
84
5
448
33
25
19
20
1.96
765313--765655
99
3.5
100
88
5
464
33
26
19
20
1.97
765313--765655
139
2.5
139
85
6
455
33
26
19
20
1.97

Tables:   1   2   3   4   5

The End!