Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008236.1 Hibiscus syriacus cultivar Beakdansim tig00110882_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1100419

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 612 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1093531--1093701
83
2.0
83
83
6
211
43
2
5
47
1.42
1093617--1093853
73
3.2
73
82
7
250
41
4
6
47
1.49
1095123--1095192
15
4.7
15
74
15
56
10
11
0
78
0.96
1095131--1095173
20
2.2
20
87
8
61
9
11
0
79
0.95
1095136--1095202
26
2.6
25
83
9
80
7
13
0
79
0.94
1095143--1095176
10
3.4
10
84
15
52
8
8
0
82
0.85
1095129--1095201
35
2.1
35
85
10
96
8
12
0
79
0.93
1095234--1095284
10
5.1
10
92
0
75
43
0
5
50
1.26
1095234--1095284
6
8.5
6
91
0
75
43
0
5
50
1.26
1095234--1095284
4
12.8
4
91
0
75
43
0
5
50
1.26
1096311--1096350
21
1.9
21
84
0
53
37
17
10
35
1.83
1099882--1099922
2
21.5
2
85
9
59
48
0
2
48
1.14

Tables:   1   2   3   4   5   6

The End!