Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000846.1 Hibiscus syriacus cultivar Beakdansim tig00001630_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  988667

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 487 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
973478--973740
145
1.8
145
83
3
350
37
11
19
30
1.88
974029--974542
143
3.6
140
82
8
612
38
10
20
30
1.87
974029--974614
143
4.1
144
81
7
457
37
11
19
30
1.88
977709--977803
48
2.0
47
91
2
154
33
18
16
30
1.94
979369--979532
51
3.3
50
93
3
260
34
3
12
49
1.57
981234--981280
18
2.6
18
100
0
94
17
29
21
31
1.96
987946--987988
20
2.2
20
87
4
61
34
9
6
48
1.62

Tables:   1   2   3   4   5

The End!