Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008727.1 Hibiscus syriacus cultivar Beakdansim tig00111794_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1388410

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 846 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1356235--1356265
14
2.2
14
100
0
62
51
6
12
29
1.65
1369762--1369808
20
2.4
19
85
3
58
29
19
25
25
1.98
1374147--1374238
26
3.6
25
75
16
73
64
1
20
14
1.35
1382355--1382421
29
2.3
29
92
0
107
25
4
5
64
1.36
1382355--1382430
29
2.6
29
87
4
91
25
3
6
64
1.35
1382679--1382761
25
3.2
25
73
22
64
16
21
1
60
1.43

Tables:   1   2   3   4   5   6   7   8

The End!