Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold132
Parameters: 2 7 7 80 10 50 1000
Length:  2458301

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   

This is table  15  of  15  ( 1722 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2404137--2404162
3
8.7
3
100
0
52
69
0
0
30
0.89
2406569--2406681
46
2.4
48
80
8
133
46
11
0
42
1.40
2406624--2406677
25
2.1
25
83
10
65
46
12
0
40
1.42
2407603--2407661
3
19.7
3
92
0
100
30
1
1
66
1.12
2412272--2412308
2
18.5
2
94
0
65
51
45
0
2
1.15
2414205--2414236
2
16.0
2
100
0
64
50
0
0
50
1.00
2416249--2416284
18
2.0
18
88
0
54
61
0
0
38
0.96
2422134--2422166
12
2.8
12
86
4
50
87
0
12
0
0.53
2422262--2422290
15
1.9
15
100
0
58
27
3
41
27
1.72
2424326--2424367
20
2.1
20
86
8
59
45
2
0
52
1.13
2424414--2424461
5
9.6
5
78
17
55
39
0
0
60
0.97
2424388--2424449
16
3.9
16
76
14
65
40
0
0
59
0.97
2426658--2426688
14
2.2
14
100
0
62
64
22
0
12
1.27
2428611--2428637
12
2.2
12
100
0
54
0
14
0
85
0.61
2429946--2430027
16
5.2
16
69
19
50
57
2
0
40
1.12
2430234--2430298
21
3.0
21
80
17
71
49
1
0
49
1.10
2430506--2430551
18
2.8
16
83
9
56
63
0
0
36
0.95
2430851--2430879
11
2.5
12
88
11
51
44
13
6
34
1.71
2432069--2432118
25
2.0
25
84
7
66
46
4
2
48
1.32
2438052--2438106
23
2.4
23
90
0
83
21
23
16
38
1.93
2438443--2438482
2
20.0
2
100
0
80
50
0
0
50
1.00
2438756--2438796
16
2.6
16
82
14
50
43
2
0
53
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2438788--2438844
23
2.5
22
83
8
62
45
0
0
54
0.99
2439467--2439532
31
2.1
30
81
13
80
63
3
1
31
1.19
2439470--2439532
18
3.8
18
67
26
50
63
3
1
31
1.19
2447965--2448040
15
5.1
15
73
6
73
47
14
30
7
1.73
2447960--2448040
30
2.7
30
90
0
126
46
13
29
9
1.75
2450917--2450951
17
2.1
17
88
0
52
31
2
0
65
1.07
2451868--2451925
18
3.4
17
71
9
55
34
0
1
63
1.04
2452099--2452143
24
2.0
22
83
16
56
51
0
0
48
1.00
2452125--2452156
15
2.1
16
94
5
57
59
0
0
40
0.97
2452834--2452867
10
3.3
10
88
8
50
79
0
0
20
0.73
2453468--2453534
20
3.3
20
80
12
91
44
2
2
49
1.32
2455696--2455765
24
2.9
24
78
16
74
40
0
0
60
0.97
2455696--2455765
23
2.9
25
79
12
76
40
0
0
60
0.97
2456234--2456301
34
2.1
31
83
8
82
76
5
1
16
1.05
2456813--2456846
2
17.0
2
100
0
68
50
0
0
50
1.00
2457093--2457180
33
2.7
34
78
13
96
38
0
0
61
0.96
2457064--2457159
45
2.1
44
81
12
115
41
0
0
58
0.98
2457102--2457173
12
5.8
13
74
22
66
38
0
0
61
0.96
2457106--2457183
21
3.8
21
75
14
74
38
0
0
61
0.96
2457076--2457191
33
3.8
31
72
18
84
38
0
0
60
1.03

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15

The End!