Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold191
Parameters: 2 7 7 80 10 50 1000
Length:  842153

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 628 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
800536--800899
158
2.3
158
78
7
373
35
12
23
28
1.91
802671--802714
18
2.4
18
81
7
54
18
0
4
77
0.94
802680--802704
10
2.5
10
100
0
50
16
0
0
84
0.63
803236--803396
85
1.9
84
85
3
225
38
15
32
13
1.87
803435--803567
61
2.2
61
95
0
239
37
9
24
28
1.87
803562--803789
62
3.7
62
74
6
178
36
13
26
23
1.92
803596--803868
121
2.3
120
82
5
318
35
14
26
23
1.94
803859--803934
32
2.5
31
79
10
84
19
17
35
27
1.94
803941--804320
28
13.5
28
83
7
427
23
19
29
27
1.98
803872--804320
84
5.3
85
83
5
507
22
20
29
27
1.98
811015--811053
13
3.0
13
96
0
69
30
17
15
35
1.91
813599--813660
32
1.9
33
90
3
99
45
16
11
27
1.81
819854--819906
20
2.6
21
85
8
74
28
13
16
41
1.86
819854--819912
20
3.0
19
85
7
73
25
11
20
42
1.86
820590--820614
12
2.1
12
100
0
50
40
8
8
44
1.63
822441--822477
13
2.8
13
95
0
65
37
16
16
29
1.90
828019--828085
33
2.0
33
88
0
98
34
11
13
40
1.81
828039--828063
13
1.9
13
100
0
50
36
16
16
32
1.90
828126--828150
13
1.9
13
100
0
50
32
16
16
36
1.90
828159--828266
52
2.1
52
91
5
175
33
17
16
32
1.93
834777--834829
19
2.7
19
88
5
70
41
13
13
32
1.82
834769--834829
21
3.0
21
83
9
74
42
11
11
34
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
834882--834907
13
2.0
13
100
0
52
30
15
15
38
1.88
835954--835979
13
2.0
13
100
0
52
30
15
15
38
1.88
838411--838696
51
5.6
51
83
2
349
30
23
10
34
1.89
838631--838936
107
2.9
107
88
5
433
26
28
16
29
1.96
838789--838862
28
2.6
28
86
0
94
21
35
21
21
1.96
838816--839050
79
3.0
79
78
4
267
25
28
14
31
1.95

Tables:   1   2   3   4   5   6

The End!