Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold285
Parameters: 2 7 7 80 10 50 1000
Length:  926752

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 631 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
866330--866430
34
3.0
34
86
0
130
41
34
0
23
1.55
868243--868274
2
16.0
2
100
0
64
50
0
0
50
1.00
871096--871136
19
2.1
20
95
4
75
26
0
0
73
0.84
871093--871150
19
3.1
19
78
11
66
31
0
0
68
0.89
871099--871150
24
2.2
24
82
6
61
30
0
0
69
0.89
873682--873744
21
3.0
22
69
23
62
50
7
3
38
1.47
877994--878319
130
2.5
127
77
7
341
35
11
24
27
1.91
878349--878448
51
2.0
51
81
0
119
35
8
24
33
1.84
878385--878664
79
3.6
78
83
4
341
33
12
24
28
1.92
880987--881093
20
5.7
19
78
18
109
41
14
16
28
1.87
881007--881076
33
2.1
33
100
0
140
40
14
18
27
1.89
880987--881093
53
2.0
53
87
7
155
41
14
16
28
1.87
881026--881056
13
2.4
13
100
0
62
38
16
16
29
1.90
881754--881830
15
5.1
15
74
14
59
45
0
6
48
1.28
883482--883539
14
4.4
14
75
16
52
53
0
0
46
1.00
883496--883546
22
2.3
22
83
10
59
49
0
1
49
1.12
884505--884535
13
2.3
14
94
5
55
32
0
12
54
1.38
885033--885071
2
19.5
2
100
0
78
48
0
0
51
1.00
887892--887925
2
17.0
2
100
0
68
50
0
0
50
1.00
890741--890781
19
2.1
20
95
4
75
26
0
0
73
0.84
890738--890795
19
3.1
19
78
11
66
31
0
0
68
0.89
890744--890795
24
2.2
24
82
6
61
30
0
0
69
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
893326--893388
21
3.0
22
69
23
62
50
7
3
38
1.47
897919--897976
28
2.1
28
84
12
75
29
18
29
22
1.98
898080--898309
80
3.0
75
82
9
277
34
13
23
28
1.93
900679--900753
19
4.2
18
75
24
70
40
14
17
28
1.89
904832--904861
10
2.8
11
90
10
53
46
0
10
43
1.37
907783--907811
2
15.0
2
92
7
51
51
0
0
48
1.00
907778--907808
15
2.1
15
93
0
53
54
0
3
41
1.16
910688--910732
18
2.4
19
92
7
74
28
0
0
71
0.87
910680--910756
16
4.6
17
78
15
72
36
0
2
61
1.10

Tables:   1   2   3   4   5   6

The End!