Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold293
Parameters: 2 7 7 80 10 50 1000
Length:  1704560

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   

This is table  12  of  12  ( 1341 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1680358--1680414
22
2.4
23
80
8
62
50
1
7
40
1.40
1680772--1680832
17
3.6
18
69
10
56
67
3
1
27
1.16
1680775--1680848
34
2.2
34
85
2
96
67
2
1
28
1.12
1680775--1680848
11
6.6
11
73
14
62
67
2
1
28
1.12
1682788--1682832
2
22.5
2
83
0
54
53
2
0
44
1.13
1682727--1682832
10
11.3
10
72
18
59
52
2
1
42
1.26
1682743--1682824
19
4.4
19
75
16
64
52
1
1
45
1.16
1685526--1685552
2
13.5
2
100
0
54
51
0
48
0
1.00
1685565--1685673
56
2.0
55
96
1
200
45
18
12
22
1.83
1686898--1686922
2
12.5
2
100
0
50
52
0
0
48
1.00
1687599--1687643
19
2.4
19
85
7
56
33
0
4
62
1.15
1687819--1687869
24
2.1
24
88
0
75
66
3
1
27
1.20
1688667--1688726
30
2.0
30
100
0
120
30
20
3
46
1.66
1695906--1695943
14
2.8
14
88
11
53
68
0
0
31
0.90
1697190--1697264
37
2.0
38
82
7
91
49
1
1
48
1.18
1697960--1698260
165
1.8
163
84
4
408
31
10
8
49
1.67
1700090--1700160
35
2.1
34
85
10
94
46
0
0
53
1.00
1700111--1700172
29
2.2
28
82
8
72
48
0
0
51
1.00
1700119--1700179
28
2.3
25
77
20
70
45
0
0
54
1.00
1701607--1701661
2
27.5
2
100
0
110
49
0
0
50
1.00
1703345--1703405
29
2.1
29
84
0
77
29
0
6
63
1.19

Tables:   1   2   3   4   5   6   7   8   9   10   11   12

The End!