Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold311
Parameters: 2 7 7 80 10 50 1000
Length:  800152

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 745 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
776314--776393
24
3.3
23
78
7
79
58
1
0
40
1.06
778135--778160
2
13.0
2
100
0
52
50
0
0
50
1.00
778159--778236
39
2.0
39
87
5
113
30
7
28
33
1.85
778160--778259
22
4.8
21
71
14
64
32
6
28
34
1.81
780491--780528
18
2.1
19
90
5
60
42
0
0
57
0.98
780616--780694
39
2.0
39
100
0
158
20
30
29
20
1.97
783199--783252
29
1.9
29
85
7
76
50
7
7
35
1.59
784857--784901
15
2.9
15
90
6
72
42
0
2
55
1.12
784888--784941
25
2.2
25
83
12
67
50
3
3
42
1.38
786045--786071
5
5.4
5
100
0
54
18
0
0
81
0.69
786429--786472
14
3.1
16
75
24
53
38
0
0
61
0.96
786429--786472
13
3.1
15
81
18
58
38
0
0
61
0.96
786906--786977
29
2.5
30
72
17
71
47
1
0
51
1.09
788576--788623
26
2.0
25
84
12
64
47
0
0
52
1.00
790038--790082
23
2.0
23
82
8
56
48
0
2
48
1.13
794927--794961
17
2.1
17
88
0
52
68
0
0
31
0.90
797703--797731
15
1.9
15
100
0
58
72
0
27
0
0.85
797707--797739
13
2.6
13
85
4
50
75
0
24
0
0.80
798606--798656
24
2.1
24
92
0
84
50
1
9
37
1.47
798855--798923
17
4.1
17
71
15
63
55
0
2
42
1.15
799123--799228
5
20.6
5
68
22
60
58
0
0
40
1.04
799111--799227
27
4.1
27
75
17
94
60
0
0
38
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
799126--799181
13
4.2
13
78
21
62
60
0
1
37
1.07
799123--799227
21
4.8
22
68
18
76
59
0
0
40
1.04
799115--799226
11
10.1
12
71
21
68
58
0
0
40
1.04

Tables:   1   2   3   4   5   6   7

The End!