Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold480
Parameters: 2 7 7 80 10 50 1000
Length:  956445

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 736 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
921007--921083
12
6.5
12
72
12
61
68
0
0
31
0.90
921002--921083
32
2.7
31
71
23
77
68
0
0
31
0.90
928700--928795
9
10.8
9
74
22
55
16
7
1
75
1.09
928737--928785
16
3.0
16
93
3
80
16
2
2
79
0.92
933628--933669
13
3.2
13
96
0
75
40
14
14
30
1.85
933816--933885
29
2.2
33
82
12
85
54
21
1
22
1.53
939908--939958
20
2.6
20
84
3
68
33
17
15
33
1.92
941236--941262
13
2.1
13
100
0
54
40
14
14
29
1.86
946261--946313
13
4.5
13
73
26
64
37
16
13
32
1.88
946261--946329
33
2.1
33
89
5
104
37
20
11
30
1.88
946358--946413
19
2.9
19
86
2
67
37
17
12
32
1.88
946398--946424
13
2.1
13
100
0
54
40
14
14
29
1.86
946432--946484
20
2.7
20
96
0
97
24
15
24
35
1.94
949234--949275
19
2.2
19
95
0
75
38
11
19
30
1.88
949234--949285
19
2.7
19
90
3
68
36
13
19
30
1.90
955909--955939
14
2.2
14
94
0
53
51
16
0
32
1.44

Tables:   1   2   3   4   5   6   7

The End!