Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold503
Parameters: 2 7 7 80 10 50 1000
Length:  995855

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 749 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
964038--964078
20
1.9
21
85
14
57
34
2
2
60
1.23
964876--964915
22
1.9
20
85
10
53
40
0
0
60
0.97
964884--964916
17
1.9
17
88
11
50
39
0
0
60
0.97
965858--965883
13
2.0
13
100
0
52
30
15
15
38
1.88
968227--968273
21
2.3
20
78
10
51
42
4
19
34
1.70
968398--968433
13
2.8
13
95
0
63
38
16
16
27
1.90
973321--973387
33
2.0
33
88
0
98
34
11
13
40
1.81
973341--973365
13
1.9
13
100
0
50
36
16
16
32
1.90
973428--973452
13
1.9
13
100
0
50
32
16
16
36
1.90
973461--973588
52
2.5
52
89
3
197
35
17
16
31
1.92
978150--978214
32
2.0
32
84
6
85
26
12
18
43
1.85
978792--978823
7
4.7
7
92
7
57
46
0
0
53
1.00
978792--978851
13
4.4
13
76
17
59
45
0
0
55
0.99
978796--978851
6
9.3
6
82
5
53
42
0
0
57
0.99
978822--978861
17
2.3
18
82
4
55
42
0
0
57
0.98
979187--979220
10
3.4
10
100
0
68
50
0
0
50
1.00
979268--979324
11
5.0
12
76
20
59
29
0
3
66
1.08
979272--979324
22
2.3
23
84
9
65
28
0
3
67
1.07
979403--979493
24
3.8
24
77
16
73
30
1
5
62
1.25
979750--979790
12
3.3
12
83
16
57
24
2
0
73
0.96
980244--980296
25
2.1
25
82
10
63
39
1
5
52
1.36
980300--980333
17
1.9
18
94
5
61
73
0
0
26
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
980851--980890
19
2.1
19
85
4
53
70
0
5
25
1.08
984916--984986
27
2.6
27
84
6
81
23
7
23
45
1.78
987561--987606
21
2.1
22
84
4
58
34
19
26
19
1.96
989489--989559
27
2.6
27
88
6
99
22
7
23
46
1.76
992410--992464
25
2.1
26
83
6
67
34
1
1
61
1.17
992965--992990
13
2.0
13
100
0
52
38
15
15
30
1.88
992946--993010
33
2.0
33
87
6
96
41
16
13
27
1.87

Tables:   1   2   3   4   5   6   7

The End!