Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168193.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_43, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  234249

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 659 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210301--210354
19
2.7
20
77
16
58
51
1
0
46
1.11
210319--210357
19
2.1
18
90
4
60
56
0
0
43
0.99
210678--210725
16
2.9
16
81
12
62
45
0
2
52
1.12
210670--210746
41
1.9
38
87
7
109
50
1
1
46
1.17
210676--210762
18
5.1
18
70
23
55
54
1
1
43
1.15
211709--211747
20
1.9
20
85
15
53
35
0
2
61
1.10
212196--212275
39
2.0
40
83
7
101
37
2
11
48
1.52
212878--213274
179
2.2
180
80
4
462
39
8
10
41
1.70
214134--214175
21
1.9
23
90
9
70
57
0
2
40
1.12
214149--214271
49
2.5
49
94
4
212
44
1
3
50
1.27
214533--214583
18
2.8
17
77
11
57
50
1
5
41
1.37
214776--214848
9
8.5
8
74
17
58
47
1
1
49
1.18
214783--214830
16
2.9
16
81
12
62
52
2
0
45
1.12
214783--214848
32
2.0
33
82
8
82
48
1
1
48
1.20
214776--214840
19
3.3
19
73
21
53
49
1
0
49
1.10
215427--215483
19
3.2
18
73
21
57
45
0
0
54
0.99
215427--215483
10
6.3
9
74
13
55
45
0
0
54
0.99
215963--216023
18
3.4
18
79
4
61
52
0
1
45
1.10
216876--216942
19
3.5
19
76
11
66
49
2
0
47
1.16
216942--216999
10
5.0
12
75
19
52
48
1
1
48
1.22
217217--217263
24
2.0
24
83
8
60
51
2
2
44
1.25
218471--218513
11
3.6
11
77
17
50
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218472--218520
25
2.0
25
92
7
84
53
0
0
46
1.00
218646--218712
29
2.3
29
75
14
66
61
1
1
35
1.15
219351--219725
180
2.1
181
81
4
427
40
9
8
41
1.67
219894--220272
181
2.1
181
82
2
476
39
8
11
41
1.71
220416--220873
181
2.5
180
79
6
453
40
8
10
40
1.70
221248--221291
19
2.2
20
84
11
56
36
2
4
56
1.32
221420--221458
20
2.0
19
85
5
51
41
2
0
56
1.13
221597--221631
18
1.9
18
88
0
52
51
2
2
42
1.31
221712--221772
29
2.0
30
87
6
88
47
3
0
49
1.18
221756--221804
13
3.6
14
77
17
50
48
0
2
48
1.12
221930--221988
21
2.7
21
84
5
73
45
5
3
45
1.42
222194--222232
10
3.9
10
87
9
53
53
0
0
46
1.00
222175--222235
14
4.4
14
77
10
63
50
1
1
45
1.21
222914--222963
24
2.0
25
84
3
66
48
0
2
50
1.12
223185--223214
15
2.1
15
93
6
53
60
0
0
40
0.97
223285--223332
9
5.4
9
75
5
53
47
4
0
47
1.21
223631--223752
57
2.2
54
83
13
144
50
0
2
47
1.14
223811--223891
13
5.6
13
72
22
56
48
0
0
51
1.00
223824--223891
22
3.1
22
78
6
84
48
0
0
51
1.00
223766--223891
49
2.6
50
81
15
135
45
3
0
51
1.17
223842--223893
17
2.9
17
75
16
52
53
0
0
46
1.00
223835--223884
26
1.9
26
84
15
68
52
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
223833--223916
34
2.6
33
80
14
86
48
0
2
48
1.14
223827--223974
71
2.1
69
79
10
158
47
2
1
49
1.21
224322--224355
16
2.1
16
88
0
50
47
0
2
50
1.16
224712--225858
180
6.4
180
75
8
806
42
10
7
39
1.67
224705--227405
356
7.6
354
75
8
1892
41
10
8
40
1.68
225865--227405
360
4.3
362
77
7
1323
40
10
8
40
1.69
225864--227405
181
8.7
179
75
8
1116
40
10
8
40
1.69
228737--228785
19
2.5
19
86
3
71
34
16
6
42
1.73
229534--229574
16
2.4
18
84
12
59
60
2
0
36
1.10
230109--231185
178
5.9
178
74
10
765
41
7
9
42
1.65
231247--231287
13
3.1
13
82
6
55
56
0
0
43
0.99
231247--231285
14
2.9
14
88
3
62
53
0
0
46
1.00
231247--231301
27
2.0
27
85
0
74
49
0
0
50
1.00
231562--232066
180
2.8
180
79
7
528
41
9
8
40
1.68
232125--232254
65
2.0
67
82
8
160
34
14
7
43
1.74

Tables:   1   2   3   4   5   6

The End!