Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007981.1 Hibiscus syriacus cultivar Beakdansim tig00110422_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1405786

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 859 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1372675--1372897
108
2.1
108
85
4
297
26
21
13
38
1.91
1372836--1372948
51
2.2
51
90
3
174
23
22
15
38
1.92
1372764--1373020
123
2.1
123
86
2
365
25
22
12
39
1.90
1372909--1372969
21
3.2
20
65
26
51
27
21
13
37
1.90
1372800--1372982
87
2.1
88
87
5
273
24
22
13
39
1.90
1372887--1373025
36
3.9
35
88
3
197
26
21
12
38
1.90
1372737--1373025
159
1.8
159
89
1
454
26
21
13
38
1.90
1383745--1383777
15
2.1
16
88
5
50
57
0
3
39
1.14
1383949--1383988
20
2.0
20
95
4
73
30
0
0
70
0.88
1383949--1384024
21
3.8
21
77
16
63
36
0
0
63
0.95
1389036--1389096
22
2.7
23
82
5
88
22
18
19
39
1.92
1389611--1389635
2
12.5
2
100
0
50
52
0
0
48
1.00
1390409--1390551
76
1.9
77
86
1
207
37
7
18
37
1.79
1392628--1392674
24
2.0
24
86
0
67
51
0
2
46
1.13
1394192--1394223
14
2.2
15
94
5
57
25
0
3
71
1.00
1397593--1397679
35
2.5
34
80
12
97
54
10
8
27
1.62
1398224--1398277
27
2.0
27
82
7
65
25
18
38
16
1.92
1400030--1400068
19
2.0
20
85
5
53
43
0
30
25
1.55
1402693--1402822
47
2.7
49
80
8
135
29
20
6
43
1.78

Tables:   1   2   3   4   5   6   7   8

The End!