Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008129.1 Hibiscus syriacus cultivar Beakdansim tig00110684_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2577775

Tables:   1   2   3   4   5   6   7   8   9   10   

This is table  10  of  10  ( 1095 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2521829--2522010
90
2.0
91
86
1
258
21
26
23
27
1.99
2525949--2525983
17
2.1
17
89
5
54
37
20
5
37
1.76
2526788--2526839
21
2.6
21
90
6
81
34
13
5
46
1.67
2534871--2534922
21
2.6
21
90
6
81
34
13
5
46
1.67
2540617--2540667
24
2.1
24
100
0
102
31
25
11
31
1.92
2540632--2540710
24
3.3
24
77
7
72
32
18
18
29
1.96
2547924--2548003
35
2.2
37
84
4
110
31
35
5
28
1.79
2550597--2550700
33
3.1
33
82
9
95
30
36
1
30
1.69
2551109--2551155
14
3.1
15
75
12
51
72
6
19
2
1.17
2554605--2554708
33
3.1
33
82
9
95
30
36
1
30
1.69
2558185--2558235
19
2.6
20
90
3
77
43
5
15
35
1.71
2561262--2561341
35
2.2
37
88
4
119
31
36
3
28
1.75
2564856--2564996
36
3.9
36
88
0
201
28
37
4
29
1.76
2567788--2567968
89
2.0
91
89
4
278
22
27
23
27
1.99
2572134--2572315
90
2.0
91
88
1
267
22
26
23
27
1.99

Tables:   1   2   3   4   5   6   7   8   9   10

The End!