Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008339.1 Hibiscus syriacus cultivar Beakdansim tig00111061_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1048908

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 733 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1028718--1028774
4
14.0
4
82
10
71
26
3
0
70
1.03
1030161--1030211
23
2.4
22
78
18
54
15
3
1
78
0.99
1035346--1035383
20
2.0
20
85
10
53
36
0
0
63
0.95
1036995--1037045
19
2.8
18
82
8
68
72
5
1
19
1.15
1037820--1037882
28
2.3
28
86
2
83
3
22
7
66
1.32
1038348--1038457
3
37.7
3
82
5
136
62
0
2
34
1.09
1038740--1039481
221
3.3
224
89
4
1092
28
20
13
37
1.90
1038740--1039481
111
6.7
112
92
3
1065
28
20
13
37
1.90
1040230--1040705
82
5.8
81
90
4
661
36
22
12
28
1.91
1040230--1040705
163
2.9
163
89
5
735
36
22
12
28
1.91
1041820--1041888
27
2.6
26
73
15
68
2
17
0
79
0.85
1041815--1041893
19
4.0
21
75
19
73
2
18
0
78
0.86
1041820--1041888
14
5.2
13
83
11
86
2
17
0
79
0.85

Tables:   1   2   3   4   5   6   7

The End!