Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008357.1 Hibiscus syriacus cultivar Beakdansim tig00111096_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1459476

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 750 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1428602--1428880
60
4.6
59
75
13
223
40
22
16
21
1.91
1428598--1428880
40
7.1
40
71
15
219
40
22
15
20
1.91
1428549--1428841
140
2.1
141
88
1
437
39
21
16
22
1.92
1429040--1429090
22
2.3
22
89
0
84
19
43
15
21
1.88
1429457--1429509
20
2.7
19
80
8
61
15
15
20
49
1.80
1431152--1431188
14
2.6
14
100
0
74
29
0
21
48
1.50
1431243--1431377
54
2.5
54
85
0
180
37
20
18
23
1.94
1434910--1434981
19
3.8
19
82
7
67
33
12
20
33
1.90
1434929--1435259
20
16.6
20
74
14
156
23
13
22
39
1.90
1434930--1435040
38
2.8
38
78
9
116
31
11
19
36
1.88
1434930--1435018
19
4.6
19
87
5
108
33
10
17
38
1.84
1434987--1435182
80
2.4
81
76
13
215
21
14
21
41
1.89
1434994--1435219
100
2.3
100
84
9
284
21
15
21
42
1.89
1435009--1435183
40
4.4
40
74
16
182
19
15
22
42
1.88
1435024--1435235
60
3.5
59
71
14
173
20
15
23
41
1.90
1434994--1435259
100
2.7
96
81
11
279
21
14
22
40
1.90
1438332--1438391
21
2.8
21
92
2
102
30
21
18
30
1.97
1438695--1438815
59
2.1
59
90
0
188
35
23
14
26
1.94
1442129--1442180
26
2.0
26
100
0
104
26
23
7
42
1.81
1442137--1442196
26
2.3
26
82
5
68
28
25
8
38
1.84
1443297--1443417
59
2.1
59
92
3
199
37
19
16
27
1.93
1443809--1444317
260
2.0
261
91
2
828
33
17
17
32
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1444554--1444610
20
2.8
20
97
0
105
29
21
28
21
1.98
1447723--1447756
9
3.9
9
84
7
52
35
0
2
61
1.11
1447722--1447760
17
2.4
17
95
4
71
33
0
5
61
1.18
1449763--1449788
12
2.2
12
100
0
52
42
30
26
0
1.56
1456952--1456998
15
2.9
16
75
15
51
70
0
10
19
1.16
1457378--1457419
22
2.0
21
90
4
66
69
2
0
28
1.01
1457535--1457567
14
2.3
15
89
5
50
54
3
0
42
1.15
1457871--1457901
16
1.9
16
100
0
62
19
9
19
51
1.74

Tables:   1   2   3   4   5   6   7

The End!