Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008821.1 Hibiscus syriacus cultivar Beakdansim tig00111989_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1271541

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 725 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1271018--1271107
14
5.7
14
74
23
81
42
23
25
8
1.83
1271010--1271124
33
3.5
33
95
0
212
45
20
24
9
1.81
1271017--1271129
19
6.8
18
72
23
88
43
22
24
9
1.83
1271141--1271195
14
3.6
14
73
21
56
9
27
23
40
1.85
1271316--1271386
33
2.2
33
92
0
115
47
18
22
11
1.80

Tables:   1   2   3   4   5   6   7

The End!