Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008983.1 Hibiscus syriacus cultivar Beakdansim tig00112347_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1350231

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 735 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1341558--1341628
37
1.9
37
83
8
92
19
4
16
59
1.54
1341630--1341678
23
2.1
23
88
0
71
22
16
20
40
1.91
1341630--1341693
23
2.8
24
80
7
69
20
15
18
45
1.86
1341874--1341985
37
3.0
37
86
5
154
48
3
3
44
1.37
1341966--1341998
11
2.8
12
81
9
50
42
6
6
45
1.53
1341928--1342035
47
2.3
49
90
4
168
46
2
5
45
1.41
1342071--1342113
15
3.0
15
80
19
56
25
0
4
69
1.07
1341978--1342084
34
3.1
34
90
6
171
42
0
5
50
1.32
1342071--1342127
28
2.0
28
80
12
64
26
1
3
68
1.15
1343377--1343427
24
2.1
25
82
7
61
17
0
1
80
0.81
1343370--1343414
21
2.1
21
88
8
65
22
2
2
73
1.05
1343964--1344012
23
2.1
23
88
0
71
22
16
20
40
1.91
1343980--1344025
23
2.0
22
84
12
58
23
15
17
43
1.87
1344148--1344230
23
3.7
22
79
4
85
31
14
13
40
1.84
1345342--1345366
12
2.1
12
100
0
50
68
0
0
32
0.90

Tables:   1   2   3   4   5   6   7

The End!