Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2504
Parameters: 2 7 7 80 10 50 1000
Length:  1293507

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 734 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1279625--1279739
36
3.3
36
79
9
130
23
33
11
32
1.90
1279625--1279718
33
2.7
36
83
8
124
22
31
12
32
1.92
1279730--1279816
32
2.7
32
94
0
147
31
36
20
11
1.88
1279822--1280429
43
12.9
49
79
12
641
25
25
17
31
1.97
1279820--1280380
92
6.1
92
95
1
973
25
25
17
31
1.97
1279820--1280380
275
2.0
278
94
2
977
25
25
17
31
1.97
1280281--1280434
52
2.9
53
81
5
177
25
24
14
34
1.94
1281236--1281260
13
1.9
13
100
0
50
36
16
16
32
1.90
1281216--1281281
32
2.0
33
91
2
107
33
12
18
36
1.88
1281301--1281325
13
1.9
13
100
0
50
32
16
16
36
1.90
1281334--1281409
32
2.4
32
97
0
143
32
21
19
26
1.97
1287835--1288123
90
3.2
89
86
1
380
28
12
28
30
1.93
1289361--1289412
20
2.6
21
81
6
63
3
19
1
75
1.06
1291679--1291712
3
11.3
3
87
0
50
32
0
38
29
1.58

Tables:   1   2   3   4   5   6   7

The End!