Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold283
Parameters: 2 7 7 80 10 50 1000
Length:  2945114

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   

This is table  15  of  15  ( 1700 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2916245--2916271
2
13.5
2
100
0
54
0
51
0
48
1.00
2916886--2916934
2
24.5
2
87
0
71
44
55
0
0
0.99
2917258--2917284
2
13.5
2
100
0
54
51
0
0
48
1.00
2921147--2921181
2
18.0
2
88
5
54
48
0
0
51
1.00
2921656--2921682
2
13.5
2
100
0
54
51
0
0
48
1.00
2922985--2923015
2
15.5
2
100
0
62
48
0
0
51
1.00
2923385--2923419
17
2.1
16
89
5
52
80
0
2
17
0.84
2923773--2923979
108
1.9
109
83
4
269
39
5
10
44
1.63
2924829--2924874
6
7.7
6
100
0
92
50
0
32
17
1.47
2925525--2925568
22
2.0
22
81
4
52
0
25
0
75
0.81
2925531--2925568
18
2.1
19
85
14
53
0
18
0
81
0.69
2927103--2927148
16
3.0
16
71
12
51
43
0
0
56
0.99
2927122--2927179
19
3.1
19
78
14
57
53
0
1
44
1.10
2927428--2927460
2
16.5
2
100
0
66
51
0
0
48
1.00
2929851--2929882
2
16.0
2
100
0
64
50
0
50
0
1.00
2931368--2931404
2
18.5
2
100
0
74
51
0
0
48
1.00
2936707--2936753
2
24.0
2
95
4
87
51
0
48
0
1.00
2938796--2938820
4
6.2
4
100
0
50
24
0
24
52
1.48
2939108--2939136
2
14.5
2
100
0
58
51
0
0
48
1.00
2941216--2941259
22
2.0
22
100
0
88
31
22
13
31
1.93

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15

The End!