Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold389
Parameters: 2 7 7 80 10 50 1000
Length:  982648

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 753 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
909399--909911
116
4.4
116
82
6
576
25
19
26
28
1.99
911024--911071
11
4.3
11
84
5
69
0
4
10
85
0.73
916893--916927
6
5.8
6
100
0
70
0
34
0
65
0.93
923659--923726
28
2.5
28
88
11
97
29
17
29
23
1.97
923715--923813
51
1.9
51
85
0
135
33
10
24
32
1.88
923766--923941
79
2.2
80
84
3
230
31
14
26
27
1.95
923948--924182
51
4.6
51
83
2
274
33
11
25
30
1.90
926622--926673
19
2.6
21
90
6
81
34
15
13
36
1.87
935471--935503
15
2.3
15
89
5
50
90
6
0
3
0.52
935484--935526
11
3.6
11
82
14
50
81
11
4
2
0.93
936749--937359
28
21.1
28
80
8
616
28
29
17
24
1.97
936749--937308
117
4.9
115
86
2
725
28
29
16
24
1.97
936749--937308
57
9.7
56
83
5
611
28
29
16
24
1.97
938460--938485
13
2.0
13
100
0
52
38
15
15
30
1.88
938442--938505
32
2.0
33
90
3
103
42
15
14
28
1.86
945871--946044
86
2.0
86
100
0
348
37
4
20
36
1.74
946744--946769
13
2.0
13
100
0
52
38
15
15
30
1.88
946726--946789
32
2.0
33
90
3
103
42
15
14
28
1.86
950527--950581
19
2.8
20
86
5
76
38
16
14
30
1.89
951505--951570
33
2.0
33
84
0
87
30
16
25
27
1.97
953098--953151
20
2.7
20
100
0
108
31
18
11
38
1.86
959243--959312
20
3.6
19
82
3
68
40
15
17
27
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
963975--964069
20
4.8
20
94
2
156
36
13
22
27
1.92
966984--967051
19
3.9
19
78
21
85
35
11
14
38
1.83
967005--967029
13
1.9
13
100
0
50
36
16
16
32
1.90
966986--967048
32
2.0
32
96
0
117
34
12
15
36
1.86
967091--967116
13
2.0
13
100
0
52
30
15
15
38
1.88
967071--967175
33
3.0
33
74
12
102
26
15
17
40
1.89
969449--969579
51
2.5
53
81
8
169
31
25
10
32
1.90
969650--969791
52
2.7
50
73
17
121
33
24
9
32
1.87
969774--969848
28
2.7
28
85
0
87
24
32
18
25
1.97
980715--980743
11
2.6
11
100
0
58
20
44
0
34
1.52
982427--982471
1
45.0
1
86
0
63
93
4
2
0
0.41

Tables:   1   2   3   4   5   6   7

The End!