Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold462
Parameters: 2 7 7 80 10 50 1000
Length:  1234098

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 854 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1212051--1213322
475
2.7
471
79
5
1384
30
17
13
37
1.89
1212929--1213715
393
2.0
393
82
5
946
31
19
12
35
1.90
1213873--1215086
475
2.5
475
82
3
1451
30
17
13
38
1.88
1215874--1216520
159
4.1
158
65
16
380
32
19
13
34
1.91
1215600--1225510
476
20.9
472
82
4
10301
31
18
13
35
1.90
1226020--1226086
37
1.9
35
88
11
102
29
25
11
32
1.92
1226544--1226569
13
2.0
13
100
0
52
30
15
15
38
1.88
1226524--1226587
32
2.0
33
87
3
94
28
14
17
40
1.88
1228554--1228718
84
2.0
84
84
2
215
26
19
3
51
1.61
1229107--1229148
21
2.0
21
85
0
57
23
28
4
42
1.74
1230841--1230905
33
2.0
33
84
0
85
44
15
12
27
1.82
1231221--1232903
471
3.6
472
80
7
1863
31
17
13
37
1.89
1233212--1233236
13
1.9
13
100
0
50
32
16
16
36
1.90
1233224--1233275
20
2.6
21
76
14
56
38
15
15
30
1.88

Tables:   1   2   3   4   5   6   7   8

The End!