Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold468
Parameters: 2 7 7 80 10 50 1000
Length:  1127621

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 750 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1076677--1076764
19
4.9
19
74
17
80
31
21
11
35
1.89
1076669--1076743
32
2.3
32
97
0
141
33
21
9
36
1.85
1076813--1076839
13
2.1
13
100
0
54
37
14
7
40
1.74
1077243--1077286
23
1.9
23
86
9
63
29
11
22
36
1.89
1079377--1079430
20
2.7
20
91
5
83
31
12
18
37
1.89
1088536--1088664
52
2.5
52
96
0
240
28
18
17
34
1.94
1088673--1088697
13
1.9
13
100
0
50
36
16
16
32
1.90
1088742--1088812
32
2.2
32
89
0
115
36
16
14
32
1.89
1089251--1089277
13
2.1
13
100
0
54
29
14
14
40
1.86
1091854--1091907
20
2.7
20
88
5
74
31
11
18
38
1.86
1095640--1095686
21
2.2
21
84
0
67
0
12
6
80
0.88
1095640--1095686
7
6.7
7
85
0
58
0
12
6
80
0.88
1097300--1097354
20
2.8
20
83
2
67
41
18
12
27
1.86
1098255--1098338
16
5.2
16
79
4
80
46
27
11
14
1.79
1098272--1098332
31
2.0
31
86
0
86
42
29
13
14
1.84
1099093--1099145
22
2.3
23
90
3
81
33
30
13
22
1.92
1099158--1099199
16
2.6
16
88
0
66
45
11
11
30
1.77
1110294--1110324
15
2.1
15
93
0
53
48
16
22
12
1.80
1112407--1112431
13
1.9
13
100
0
50
36
16
16
32
1.90
1112560--1112598
1
39.0
1
92
0
51
92
0
2
5
0.46
1112557--1112596
20
2.0
20
100
0
80
85
0
5
10
0.75
1112603--1112659
21
2.7
21
97
0
105
33
10
19
36
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1112715--1112782
19
3.9
19
78
21
85
35
11
14
38
1.83
1112736--1112760
13
1.9
13
100
0
50
36
16
16
32
1.90
1112717--1112779
32
2.0
32
96
0
117
34
12
15
36
1.86
1112822--1112847
13
2.0
13
100
0
52
30
15
15
38
1.88
1112802--1112868
33
2.0
33
88
0
98
25
14
16
43
1.86
1115321--1115393
27
2.6
28
84
4
94
24
32
20
21
1.97
1115376--1115546
51
3.3
51
79
4
198
29
26
11
32
1.92
1115534--1115610
28
2.8
27
82
7
93
24
32
15
27
1.95

Tables:   1   2   3   4   5   6   7

The End!