Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold470
Parameters: 2 7 7 80 10 50 1000
Length:  597437

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
563997--564035
14
2.6
15
80
12
53
46
0
0
53
1.00
564004--564064
7
8.9
7
78
18
58
37
0
0
62
0.96
564027--564072
18
2.5
18
82
10
58
34
0
0
65
0.93
564309--564341
7
4.6
7
92
7
57
12
0
0
87
0.53
564309--564341
15
2.3
15
94
5
59
12
0
0
87
0.53
564448--564513
19
3.7
19
74
11
68
39
0
0
60
0.97
564441--564516
25
2.8
27
78
15
86
40
0
0
59
0.98
570584--570625
22
1.9
22
85
9
59
64
4
11
19
1.44
571450--571489
13
3.2
13
82
3
55
50
0
0
50
1.00
571919--571964
20
2.3
20
82
10
60
54
0
0
45
0.99
572534--572587
21
2.5
21
87
6
72
51
0
0
48
1.00
573561--573621
32
1.9
32
89
0
95
57
0
0
42
0.98
573604--573677
28
2.7
27
81
8
87
59
2
1
36
1.20
573577--573686
26
4.1
27
74
16
95
57
1
0
40
1.16
574484--574516
15
2.2
15
89
10
50
36
0
0
63
0.95
574621--574709
17
5.7
16
69
24
57
46
0
1
52
1.07
574672--574767
30
3.4
30
75
13
105
51
1
0
47
1.07
574707--574779
25
3.0
24
76
9
67
54
1
0
43
1.08
575033--575088
27
2.0
28
86
3
78
58
0
3
37
1.15
575040--575087
16
3.3
16
72
24
52
60
0
0
39
0.97
575072--575110
20
2.0
20
90
10
62
56
0
0
43
0.99
575040--575111
27
2.6
27
82
6
81
59
0
0
40
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
581389--581442
16
3.2
18
87
10
62
37
0
0
62
0.95
581398--581461
16
4.1
16
88
6
87
39
0
0
60
0.97
592133--592589
238
1.9
238
99
0
896
41
16
16
25
1.89
595610--595642
7
4.7
7
100
0
66
27
15
0
57
1.38

Tables:   1   2   3   4   5   6

The End!