Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold60
Parameters: 2 7 7 80 10 50 1000
Length:  3815296

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   

This is table  21  of  21  ( 2419 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3812233--3812328
42
2.3
42
82
12
108
33
48
12
5
1.63
3812707--3812867
7
20.0
7
72
23
99
39
48
7
4
1.51
3812708--3812787
15
5.2
14
79
13
70
41
51
2
5
1.37
3812740--3812789
22
2.3
22
89
6
75
44
54
0
2
1.11
3813107--3813228
7
15.3
7
68
24
57
36
49
5
9
1.58
3813436--3815294
7
246.0
7
75
18
1144
37
54
1
6
1.34
3813522--3813664
36
3.8
35
77
12
124
38
55
1
4
1.28
3813436--3814985
29
50.3
29
74
18
1016
38
53
1
6
1.36
3813612--3813707
16
6.1
17
78
17
68
36
54
4
5
1.42
3813603--3814965
38
35.3
38
76
19
642
38
53
1
6
1.35
3813762--3814965
81
14.2
90
74
19
407
39
53
0
6
1.32
3813842--3813947
45
2.3
45
82
9
135
40
50
2
5
1.40
3814982--3815071
1
90.0
1
86
0
99
4
90
0
5
0.57
3814982--3815071
43
2.1
41
89
4
135
4
90
0
5
0.57
3814982--3815087
34
3.1
34
78
8
106
8
85
0
5
0.73
3814992--3815069
22
3.6
22
87
8
115
5
91
0
3
0.52
3815029--3815087
27
2.1
27
84
3
73
10
86
0
3
0.68
3815075--3815255
58
3.1
56
81
9
175
44
50
0
4
1.26
3815227--3815267
19
2.2
19
86
0
55
43
51
0
4
1.23

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21

The End!