Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001836.1 Hibiscus syriacus cultivar Beakdansim tig00003715_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2428596

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   

This is table  12  of  12  ( 1328 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2399929--2399979
19
2.7
19
96
0
93
23
27
17
31
1.97
2399863--2400044
83
2.2
83
85
8
237
25
21
17
35
1.95
2412311--2412354
22
2.0
21
86
4
61
47
15
15
20
1.82
2413110--2413167
20
2.9
20
84
0
71
24
25
20
29
1.99
2415590--2415648
30
2.0
30
83
6
75
38
6
18
35
1.78
2417556--2417584
2
14.5
2
100
0
58
48
0
0
51
1.00
2421844--2421906
33
1.9
33
83
6
83
46
7
17
28
1.76
2425730--2425811
21
3.8
22
79
9
89
21
35
24
18
1.96

Tables:   1   2   3   4   5   6   7   8   9   10   11   12

The End!