Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000520.1 Hibiscus syriacus cultivar Beakdansim tig00000991_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1956684

Tables:   1   2   3   4   5   6   7   8   9   10   11   

This is table  11  of  11  ( 1212 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1917537--1919601
54
38.2
54
88
1
2861
29
20
17
32
1.95
1921382--1921406
2
12.5
2
100
0
50
48
0
0
52
1.00
1923458--1923704
81
3.1
81
86
1
327
26
21
11
40
1.87
1923845--1924335
54
9.1
53
88
4
680
29
19
17
32
1.95
1925611--1925651
16
2.7
16
79
20
52
58
0
2
39
1.11
1926137--1926178
19
2.2
19
83
8
50
66
4
0
28
1.12
1933938--1933999
30
2.1
30
87
0
88
45
4
17
32
1.70
1938370--1938663
45
6.6
44
87
3
417
39
6
22
31
1.79
1938370--1938663
90
3.3
90
94
0
475
39
6
22
31
1.79
1942951--1942982
15
2.1
15
94
0
55
53
15
25
6
1.65
1948284--1948325
20
2.2
20
91
4
68
61
14
7
16
1.53
1950933--1951047
58
2.0
58
89
3
178
33
19
14
33
1.92

Tables:   1   2   3   4   5   6   7   8   9   10   11

The End!