Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006189.1 Hibiscus syriacus cultivar Beakdansim tig00014728_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  980383

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 735 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
946472--946535
29
2.2
30
86
8
96
68
3
3
25
1.18
947292--947323
3
10.7
3
100
0
64
34
0
34
31
1.58
949113--949159
20
2.3
21
81
7
60
25
12
19
42
1.86
949128--949167
20
2.0
20
100
0
80
25
15
15
45
1.84
958998--959026
14
2.0
15
93
6
51
62
13
3
20
1.46
959318--959347
14
2.1
15
93
6
53
30
3
0
66
1.07
960281--960307
14
1.9
14
100
0
54
44
25
0
29
1.54
965251--965301
20
2.5
21
84
6
61
29
13
27
29
1.94
965271--965415
54
2.7
53
86
3
191
28
19
22
28
1.98
965992--966081
23
4.0
23
80
15
116
23
20
26
30
1.98
966500--966539
20
2.0
20
85
9
55
32
0
12
55
1.38
967346--967408
15
4.2
15
79
0
63
23
53
1
20
1.54
971360--971403
18
2.4
18
100
0
88
38
34
0
27
1.57
971863--971904
20
2.1
20
100
0
84
23
0
38
38
1.55
971866--971912
20
2.3
20
92
0
76
27
0
36
36
1.57

Tables:   1   2   3   4   5   6   7

The End!