Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007883.1 Hibiscus syriacus cultivar Beakdansim tig00110263_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1590433

Tables:   1   2   3   4   5   6   7   8   9   

This is table  9  of  9  ( 970 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1562512--1562606
27
3.5
27
92
0
154
22
3
29
45
1.68
1567049--1567096
3
16.0
3
95
0
87
64
2
0
33
1.05
1572268--1572321
24
2.5
22
82
14
67
24
3
3
68
1.22
1573406--1573496
24
3.9
24
85
4
132
32
25
19
21
1.97
1574264--1574304
13
3.2
13
96
0
73
31
41
12
14
1.83
1578121--1578445
150
2.2
150
94
2
573
34
20
17
26
1.95
1578900--1579056
64
2.4
63
80
10
158
28
18
20
33
1.96
1579089--1579128
21
1.9
21
100
0
80
30
20
20
30
1.97
1581979--1582067
46
1.9
47
88
2
135
31
26
22
19
1.97
1581971--1582069
23
4.2
23
82
1
117
32
24
23
20
1.98

Tables:   1   2   3   4   5   6   7   8   9

The End!