Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008298.1 Hibiscus syriacus cultivar Beakdansim tig00110984_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1334650

Tables:   1   2   3   4   5   6   7   

This is table  7  of  7  ( 725 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1322713--1322757
22
2.0
22
83
8
56
42
11
8
37
1.72
1322775--1322847
23
3.2
23
90
0
110
35
5
20
38
1.76
1323264--1323336
23
3.2
23
88
0
101
36
5
19
38
1.75
1322332--1323737
490
2.9
488
96
0
2521
41
7
10
40
1.68
1326397--1326440
17
2.6
17
88
0
70
22
31
15
29
1.95

Tables:   1   2   3   4   5   6   7

The End!