Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008914.1 Hibiscus syriacus cultivar Beakdansim tig00112217_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1601432

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 853 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1577737--1577841
31
3.4
29
78
6
93
30
30
25
13
1.94
1580013--1580085
22
3.3
22
73
7
67
36
20
21
20
1.95
1583536--1583569
12
2.8
12
90
0
59
23
32
23
20
1.98
1584277--1584318
17
2.6
17
81
7
52
2
16
11
69
1.29
1584292--1584350
29
1.9
31
86
10
86
13
18
5
62
1.48
1593199--1593275
32
2.5
30
78
12
77
23
31
27
18
1.97
1595438--1595466
13
2.2
13
100
0
58
34
24
27
13
1.93
1596722--1597351
51
12.5
51
83
5
710
26
10
21
42
1.84
1596949--1597037
25
3.5
25
68
14
74
26
8
25
38
1.86
1596926--1597003
25
3.0
25
64
17
61
24
8
25
41
1.84
1596939--1597019
25
3.2
25
66
16
67
24
9
25
39
1.86
1596723--1597350
297
2.1
305
85
5
855
26
10
21
42
1.84
1597555--1597827
68
4.0
69
81
3
309
26
22
27
23
2.00

Tables:   1   2   3   4   5   6   7   8

The End!