Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008985.1 Hibiscus syriacus cultivar Beakdansim tig00112349_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1528252

Tables:   1   2   3   4   5   6   7   8   9   

This is table  9  of  9  ( 976 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1495925--1495988
30
2.1
30
85
0
83
34
28
18
18
1.95
1496650--1496887
64
3.7
63
80
7
266
27
18
19
34
1.96
1497997--1498092
38
2.5
38
89
0
147
22
26
23
27
2.00
1498601--1498668
35
1.9
35
100
0
136
22
32
27
17
1.96
1498597--1498661
20
3.5
20
65
26
61
24
29
32
13
1.94
1504371--1504466
38
2.5
38
87
0
138
23
27
21
27
1.99
1504373--1504434
17
3.4
17
70
23
54
24
32
22
20
1.98
1504981--1505051
35
2.0
36
94
2
126
19
29
33
16
1.94
1509251--1509301
18
2.7
19
76
17
61
27
27
13
31
1.94
1511861--1511894
2
17.0
2
93
0
59
50
0
2
47
1.16
1514048--1514099
26
2.0
26
92
0
86
36
13
28
21
1.91
1519035--1519093
28
2.1
29
83
3
75
38
6
5
49
1.52
1520575--1520642
20
3.5
19
85
4
91
36
11
20
30
1.89
1522611--1522879
45
6.0
46
84
3
332
27
18
9
44
1.81
1522608--1522879
90
3.0
91
86
1
386
26
18
10
44
1.82
1522623--1522879
135
1.9
136
87
2
383
27
18
9
44
1.81

Tables:   1   2   3   4   5   6   7   8   9

The End!