Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009460.1 Hibiscus syriacus cultivar Beakdansim tig00113722_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2853300

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   

This is table  14  of  14  ( 1601 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2757301--2757593
127
2.3
129
90
5
479
51
13
0
34
1.44
2757301--2757360
22
2.7
22
100
0
120
51
15
0
33
1.43
2757429--2757496
22
3.2
21
74
14
68
52
17
0
29
1.45
2757454--2757634
53
3.5
52
90
5
269
51
11
0
37
1.38
2757497--2757540
22
2.0
22
100
0
88
50
13
0
36
1.42
2757214--2757540
75
4.3
75
78
9
385
51
14
0
33
1.45
2757500--2757548
22
2.2
22
88
3
71
55
14
0
30
1.40
2757550--2757593
21
2.1
22
91
8
74
54
9
0
36
1.32
2757617--2757725
15
7.2
14
85
12
137
48
0
1
48
1.18
2757595--2757725
30
4.3
30
84
11
169
48
1
1
48
1.20
2757611--2757725
45
2.5
46
87
5
162
48
1
1
47
1.22
2764413--2764444
17
1.9
17
93
6
57
31
6
9
53
1.58
2765903--2765975
21
3.5
21
86
3
94
54
21
20
2
1.57
2766399--2766500
42
2.4
43
85
6
127
33
22
13
30
1.93
2766667--2766844
42
4.2
42
85
0
221
29
24
19
27
1.98
2767790--2767845
2
28.0
2
100
0
112
50
0
0
50
1.00
2771157--2771203
2
23.0
2
95
4
85
48
0
2
48
1.13
2778073--2778102
8
3.6
8
95
4
51
46
0
3
50
1.18
2780042--2780089
24
2.0
24
88
8
71
45
2
0
52
1.12
2799853--2799885
16
2.1
16
94
0
57
33
27
6
33
1.81
2801140--2801310
7
24.6
7
81
5
123
47
29
0
22
1.51
2801131--2801313
42
4.4
42
80
6
196
46
29
0
23
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2801243--2801289
20
2.3
20
96
3
85
36
31
0
31
1.58
2801391--2801420
14
2.1
14
93
0
51
43
0
6
50
1.28
2801475--2801529
26
2.1
26
82
0
74
20
18
25
36
1.94
2801897--2801941
23
2.0
23
86
0
63
44
8
20
26
1.80
2802808--2802873
4
17.2
4
74
14
50
45
19
3
31
1.66
2802771--2802894
8
15.0
8
70
23
62
45
12
5
36
1.66
2802808--2802874
15
4.4
16
73
17
52
44
19
2
32
1.66
2803138--2803196
2
31.5
2
75
13
54
45
3
3
47
1.36
2805090--2805122
16
2.1
16
94
0
57
33
9
27
30
1.88
2810369--2810402
15
2.3
15
90
5
52
52
0
0
47
1.00
2810597--2810684
37
2.4
37
92
0
149
36
17
27
19
1.94
2810619--2810699
37
2.2
37
90
0
126
39
19
24
16
1.91
2827208--2827237
3
10.0
3
92
0
51
30
0
36
33
1.58
2827419--2827534
42
2.8
38
76
10
106
18
3
6
70
1.24
2827495--2827531
20
1.9
19
89
10
58
24
0
5
70
1.08
2832433--2832486
15
3.7
15
80
9
76
18
18
25
37
1.94
2832429--2832494
28
2.4
28
100
0
132
22
16
24
36
1.94
2832429--2832494
15
4.8
13
71
14
60
22
16
24
36
1.94
2853154--2853187
16
2.1
16
94
0
59
32
8
26
32
1.87

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14

The End!