Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold106
Parameters: 2 7 7 80 10 50 1000
Length:  4928209

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   

This is table  27  of  27  ( 3135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4904598--4904696
50
2.0
49
84
3
128
28
20
14
37
1.91
4905118--4905162
2
22.5
2
100
0
90
48
0
51
0
1.00
4905215--4905306
46
2.0
46
95
0
166
45
10
23
19
1.82
4909831--4909903
16
4.6
16
77
6
76
10
15
31
42
1.81
4911019--4911050
2
16.5
2
93
6
57
50
0
0
50
1.00
4912876--4912929
16
3.4
16
84
0
54
9
14
38
37
1.79
4912892--4912938
16
2.9
16
87
0
58
8
10
38
42
1.70
4912941--4912987
21
2.2
22
88
3
69
8
0
42
48
1.33
4913294--4913321
5
5.6
5
100
0
56
82
0
0
17
0.68
4916968--4917008
13
3.5
12
83
12
50
36
0
2
60
1.10
4917476--4926851
7
1321.3
7
78
14
6587
41
44
9
4
1.58
4919363--4919420
26
2.3
26
86
13
86
48
37
12
1
1.51
4926962--4927019
20
2.8
20
82
15
64
24
58
15
1
1.46
4925521--4927019
7
215.1
7
81
13
263
41
56
1
1
1.14
4927044--4927086
22
2.0
22
85
0
59
44
37
0
18
1.50

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27

The End!