Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold282
Parameters: 2 7 7 80 10 50 1000
Length:  1446459

Tables:   1   2   3   4   5   6   7   8   9   10   

This is table  10  of  10  ( 1099 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1389997--1392167
318
6.8
317
85
2
2896
32
16
14
36
1.90
1389997--1392167
634
3.4
632
87
3
3042
32
16
14
36
1.90
1392166--1439043
317
146.5
317
77
9
35084
31
17
16
34
1.92
1408581--1408656
12
6.9
11
75
15
52
39
2
48
9
1.49
1408580--1408665
24
3.8
24
72
17
85
41
2
45
10
1.51
1408571--1408689
42
2.8
42
90
0
193
43
2
45
8
1.47
1434562--1437320
158
17.3
156
63
18
590
32
18
15
34
1.92
1439208--1439295
45
2.0
45
86
4
124
52
46
1
0
1.08
1439267--1439335
13
5.3
13
73
11
61
42
57
0
0
0.98
1439262--1439333
21
3.6
21
78
16
89
43
56
0
0
0.99
1439305--1439347
14
3.1
14
83
6
52
39
60
0
0
0.97
1439262--1439356
18
4.9
19
74
16
65
43
56
0
0
0.99
1439347--1439414
30
2.2
32
84
12
88
58
38
2
0
1.13
1439367--1439418
20
2.6
19
79
11
59
55
40
3
0
1.18
1439337--1439414
11
6.7
12
72
21
60
57
39
2
0
1.12
1439413--1439474
12
4.8
13
71
26
51
33
66
0
0
0.92
1439427--1439474
25
1.9
24
91
8
78
37
62
0
0
0.95
1443448--1445172
331
5.3
323
74
17
879
33
17
15
32
1.92
1444926--1446243
664
2.0
639
80
13
1449
33
17
16
32
1.93

Tables:   1   2   3   4   5   6   7   8   9   10

The End!