Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold331
Parameters: 2 7 7 80 10 50 1000
Length:  1394875

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 856 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1368745--1369353
260
2.4
260
85
4
840
28
30
17
23
1.97
1370181--1370306
20
5.7
20
72
20
108
30
15
11
41
1.84
1375046--1375088
21
2.0
22
86
4
61
51
0
20
27
1.48
1375335--1375387
20
2.7
20
75
21
58
54
20
1
22
1.54
1379021--1379149
52
2.5
52
93
0
222
30
19
15
34
1.93
1379158--1379182
13
1.9
13
100
0
50
36
16
16
32
1.90
1379235--1379283
19
2.6
19
96
3
91
36
18
12
32
1.88
1379272--1379296
13
1.9
13
100
0
50
32
16
16
36
1.90
1380857--1380888
16
2.0
17
88
11
50
15
21
12
50
1.77
1385544--1385574
15
2.1
15
93
0
53
48
16
22
12
1.80
1387610--1387645
13
2.8
13
91
0
54
38
19
11
30
1.86
1387757--1387802
21
2.2
20
81
11
58
32
19
4
43
1.71
1388841--1388873
15
2.1
17
88
11
52
27
12
21
39
1.88
1390212--1390237
13
2.0
13
100
0
52
38
15
15
30
1.88
1390194--1390257
32
2.0
33
90
3
103
42
15
14
28
1.86
1392754--1392816
20
3.5
20
68
31
70
31
19
17
31
1.95

Tables:   1   2   3   4   5   6   7   8

The End!