Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Scaffold48 Parameters: 2 7 7 80 10 50 1000 Length: 4619657

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   

This is table  13  of  27  ( 3212 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1826322--1826384
21
3.0
20
76
19
74
63
1
0
34
1.04
1827921--1827954
13
2.5
13
90
4
50
26
8
0
64
1.22
1827905--1827964
14
4.1
14
73
14
50
31
8
0
60
1.27
1828803--1828838
14
2.6
14
91
4
56
61
2
0
36
1.11
1828845--1828870
13
2.0
13
100
0
52
38
7
7
46
1.61
1835040--1835070
2
16.0
2
93
6
55
48
0
0
51
1.00
1839132--1839180
21
2.3
23
80
20
61
53
2
4
40
1.32
1839523--1839570
17
2.9
17
81
9
55
31
0
0
68
0.90
1842175--1842199
2
12.5
2
100
0
50
48
0
0
52
1.00
1845200--1845239
10
3.8
10
87
12
62
55
2
0
42
1.13
1845188--1845239
11
4.8
10
79
13
50
51
1
0
46
1.12
1845187--1845248
22
2.8
22
92
0
97
51
3
0
45
1.17
1846859--1846893
14
2.5
13
86
13
52
51
0
0
48
1.00
1849105--1849133
14
2.0
15
93
6
51
55
0
0
44
0.99
1849601--1849659
18
3.3
18
80
2
66
66
1
6
25
1.26
1850138--1850170
16
2.1
16
88
11
50
54
0
3
42
1.15
1850199--1850266
26
2.6
28
75
13
72
64
0
0
35
0.94
1850293--1850319
7
3.9
7
100
0
54
44
0
0
55
0.99
1853499--1853534
14
2.6
14
91
4
56
52
0
5
41
1.24
1858969--1859020
17
2.9
17
86
13
61
38
0
0
61
0.96
1858977--1859025
19
2.6
19
79
20
59
40
0
0
59
0.98
1859236--1859283
3
16.7
3
91
8
82
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1860252--1860328
32
2.4
32
75
14
77
55
1
0
42
1.07
1861183--1861280
30
3.2
29
77
15
90
65
3
4
27
1.26
1861202--1861285
10
8.0
10
71
9
60
70
2
2
25
1.11
1863534--1863558
13
1.9
13
100
0
50
76
0
24
0
0.80
1863671--1863709
2
19.5
2
100
0
78
0
48
0
51
1.00
1868444--1868468
2
12.5
2
100
0
50
48
0
0
52
1.00
1875048--1875091
18
2.3
19
81
18
56
38
0
0
61
0.96
1875527--1875730
21
9.4
21
72
11
96
40
1
4
53
1.32
1875611--1875747
33
4.3
31
79
11
143
44
0
0
54
1.10
1875650--1875746
42
2.3
41
91
5
135
46
1
0
52
1.07
1875606--1875709
54
1.9
53
86
5
147
43
0
1
54
1.11
1875644--1875731
21
4.2
21
82
5
115
47
0
0
52
1.00
1875729--1875767
21
1.9
21
84
5
53
35
10
0
53
1.35
1876182--1876216
3
11.7
3
87
0
52
71
0
0
28
0.86
1876367--1876398
2
16.0
2
100
0
64
50
0
0
50
1.00
1876671--1876730
2
30.0
2
82
0
57
50
11
0
38
1.39
1876675--1876730
20
2.8
20
86
0
76
50
12
0
37
1.41
1878538--1878590
28
1.9
28
81
11
65
41
13
9
35
1.76
1879243--1879287
23
2.0
22
86
4
63
66
0
2
31
1.04
1882450--1882477
2
14.0
2
100
0
56
50
0
0
50
1.00
1883078--1883124
24
2.0
24
83
8
60
57
2
8
31
1.41
1883223--1883266
2
22.0
2
90
0
70
45
0
4
50
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1895609--1895655
21
2.2
22
84
3
60
40
19
21
19
1.92
1897533--1897609
27
3.0
25
79
7
84
20
12
25
40
1.89
1902933--1903002
27
2.5
28
84
13
92
44
24
7
24
1.78
1906310--1906345
18
2.0
18
100
0
72
44
5
16
33
1.71
1907007--1907046
20
2.1
19
86
9
55
32
0
2
65
1.06
1907761--1907785
12
2.1
12
100
0
50
24
0
16
60
1.36
1908015--1908204
83
2.3
82
83
7
237
47
9
6
36
1.62
1909017--1909073
2
29.5
2
82
7
73
49
1
3
45
1.29
1915027--1915112
5
17.8
5
72
20
67
61
0
1
37
1.04
1915027--1915109
24
3.5
24
74
11
80
62
0
1
36
1.03
1916765--1916803
20
1.9
21
84
5
53
53
0
0
46
1.00
1926312--1926563
132
1.9
132
95
0
450
32
20
15
30
1.94
1927844--1927885
6
7.3
6
91
5
61
14
2
16
66
1.35
1928362--1928404
15
2.7
16
85
7
61
48
2
0
48
1.14
1928501--1928576
10
7.3
10
77
18
66
39
0
1
59
1.06
1928705--1928762
21
2.8
22
80
17
70
55
0
0
44
0.99
1928685--1928760
20
3.8
20
75
16
61
57
0
0
42
0.98
1928811--1928858
18
2.7
18
80
3
62
37
0
0
62
0.95
1930339--1930386
17
2.8
16
81
12
60
60
0
0
39
0.97
1949157--1949194
2
19.0
2
94
0
67
0
47
0
52
1.00
1950688--1950717
1
30.0
1
100
0
60
0
100
0
0
0.00
1951941--1951995
26
2.1
26
90
6
85
41
1
3
52
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1951988--1952075
28
3.1
26
75
18
79
39
1
1
57
1.13
1952030--1952067
20
1.9
19
89
5
58
39
0
0
60
0.97
1951988--1952086
29
3.4
27
76
16
85
39
2
1
57
1.17
1951891--1952075
99
1.9
96
81
7
223
40
2
2
55
1.26
1952601--1952661
24
2.5
24
76
10
61
55
6
6
31
1.51
1953023--1953129
16
7.4
14
76
14
67
61
0
0
37
1.02
1953066--1953146
8
9.9
8
76
18
69
54
2
0
43
1.13
1953038--1953124
16
5.6
16
76
20
87
58
1
0
40
1.05
1954360--1954420
25
2.3
26
81
16
72
54
0
0
45
1.00
1959425--1959477
23
2.4
21
76
14
54
45
0
7
47
1.31
1959669--1959706
17
2.2
17
86
9
51
55
0
0
44
0.99
1961047--1961089
22
2.0
22
85
0
59
48
11
2
37
1.52
1961568--1961600
5
6.8
5
93
6
59
18
0
0
81
0.68
1962085--1962224
5
27.6
5
71
16
101
60
0
1
38
1.06
1962092--1962226
49
2.8
48
81
10
154
60
0
1
38
1.06
1965533--1965565
17
1.9
17
88
11
50
42
0
3
54
1.15
1965675--1965713
3
13.0
3
100
0
78
66
0
0
33
0.92
1965887--1965933
14
3.1
15
79
20
53
38
0
2
59
1.09
1966464--1966503
13
3.1
13
85
7
55
37
0
0
62
0.95
1966492--1966531
20
2.0
20
85
9
55
65
0
0
35
0.93
1966495--1966593
49
2.0
48
81
11
112
51
2
1
45
1.19
1966974--1967009
2
18.0
2
100
0
72
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1967209--1967268
21
3.0
21
74
20
56
68
0
1
30
0.99
1967216--1967264
13
3.8
12
79
12
53
73
0
0
26
0.83
1967229--1967263
16
2.1
17
94
5
63
74
0
0
25
0.82
1967554--1967607
12
4.7
12
77
15
60
64
0
0
35
0.94
1967566--1967634
18
3.5
19
78
21
63
60
0
0
39
0.97
1967608--1967645
15
2.5
16
79
12
53
47
0
0
52
1.00
1967593--1967639
22
2.1
23
84
11
62
53
0
0
46
1.00
1967582--1967644
32
1.9
33
83
3
83
53
0
0
46
1.00
1971758--1972175
210
2.0
210
97
0
784
33
13
21
31
1.92
1976006--1976051
14
3.1
15
81
9
58
65
0
0
34
0.93
1976337--1976448
11
8.6
13
71
20
67
59
2
0
37
1.11
1977685--1977892
102
2.0
102
95
0
371
37
20
12
29
1.90
1982656--1982684
12
2.3
13
94
5
51
24
3
0
72
1.00
1983116--1983144
2
14.5
2
100
0
58
51
48
0
0
1.00
1984768--1984822
24
2.3
24
84
6
67
41
1
0
56
1.10
1986308--1986340
16
2.0
17
88
5
50
75
0
0
24
0.80
1992434--1992464
2
15.5
2
100
0
62
51
0
0
48
1.00
1993713--1993752
21
1.9
21
85
10
55
37
0
0
62
0.95
1994556--1994640
38
2.2
38
81
12
93
45
1
0
52
1.08
1995282--1995373
35
2.5
35
81
8
87
44
0
0
55
0.99
1996967--1997008
22
1.9
22
90
9
68
61
0
0
38
0.96
2001957--2001983
3
9.0
3
100
0
54
66
0
33
0
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2004566--2004594
14
2.1
14
100
0
58
55
0
6
37
1.27
2006211--2006244
2
17.0
2
100
0
68
50
0
0
50
1.00
2012332--2012367
2
18.0
2
94
0
63
47
0
52
0
1.00
2012588--2012613
2
13.0
2
100
0
52
50
0
0
50
1.00
2012930--2012959
2
15.0
2
100
0
60
50
0
0
50
1.00
2013690--2013718
11
2.5
12
88
11
51
31
0
0
68
0.89
2014158--2014217
26
2.3
26
88
2
86
43
0
1
55
1.10
2014901--2014964
22
2.9
22
72
11
58
32
0
4
62
1.16
2014985--2015056
29
2.4
30
86
2
92
41
0
0
58
0.98
2015011--2015062
5
10.0
5
79
12
52
36
1
0
61
1.07

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27