Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold498
Parameters: 2 7 7 80 10 50 1000
Length:  1804022

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   

This is table  17  of  17  ( 1953 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1770136--1770211
20
3.7
20
78
13
73
32
15
11
39
1.84
1772595--1772807
95
2.2
95
80
6
225
30
22
11
35
1.89
1773867--1773906
20
2.0
21
90
5
64
30
17
12
40
1.86
1775945--1776226
79
3.6
79
88
3
399
27
25
13
34
1.93
1776164--1776278
51
2.3
51
81
4
142
31
26
10
32
1.90
1776084--1776361
130
2.1
130
83
1
360
30
25
11
32
1.92
1776007--1776438
209
2.1
207
85
3
591
29
25
11
33
1.91
1776237--1776481
79
3.1
78
84
2
251
31
22
10
35
1.88
1779553--1779650
51
1.9
52
85
2
135
37
9
21
31
1.85
1779593--1779886
79
3.7
78
81
2
302
36
13
21
28
1.91
1779826--1779927
51
2.0
51
90
3
161
34
9
25
30
1.88
1779741--1780012
130
2.1
129
86
0
373
37
12
22
27
1.90
1780062--1780143
28
3.0
28
80
8
96
37
21
20
19
1.94
1782078--1782133
20
2.7
20
91
5
85
42
10
14
32
1.80
1782759--1783209
61
7.4
61
81
3
467
29
17
25
27
1.97
1782817--1783209
181
2.2
182
83
3
497
29
17
25
28
1.97
1784174--1784201
12
2.3
12
100
0
56
7
7
0
85
0.73
1784174--1784222
16
3.4
15
81
13
50
4
4
4
87
0.73
1784174--1784221
10
4.7
10
82
12
53
4
4
4
87
0.74
1784175--1784238
18
3.5
17
79
14
56
4
4
6
84
0.87
1784172--1784238
28
2.4
28
85
7
91
4
4
8
82
0.95
1793165--1793214
17
2.6
19
75
21
50
48
2
0
50
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1793467--1793531
19
3.2
20
76
12
69
33
6
3
56
1.39
1793549--1793604
27
2.2
25
84
12
69
35
1
1
60
1.17
1793558--1793643
26
3.2
26
77
9
84
38
4
1
55
1.28
1794764--1794871
54
2.0
54
100
0
216
33
12
27
25
1.93
1801401--1801435
17
2.1
17
94
5
63
62
14
5
17
1.49
1801399--1801437
16
2.5
15
88
12
60
56
12
7
23
1.62
1802225--1802272
19
2.3
22
86
10
66
25
4
6
64
1.35
1802354--1802382
14
2.0
15
93
6
51
62
0
3
34
1.12
1803092--1803140
21
2.3
22
82
7
64
67
0
2
30
1.02
1803092--1803231
57
2.4
57
76
14
144
60
1
1
36
1.14
1803644--1803677
11
3.1
11
88
12
52
47
0
0
52
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17

The End!