Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold507
Parameters: 2 7 7 80 10 50 1000
Length:  914714

Tables:   1   2   3   4   5   6   7   8   

This is table  8  of  8  ( 862 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
899416--899467
28
1.9
28
88
7
81
55
0
0
44
0.99
899697--899721
2
12.5
2
100
0
50
48
0
0
52
1.00
899847--899901
27
2.0
27
83
13
69
49
1
1
47
1.23
899885--899919
3
11.7
3
100
0
70
65
0
0
34
0.93
900274--900329
19
2.8
20
78
19
64
58
0
3
37
1.15
900274--900343
21
3.4
21
79
14
67
55
0
4
40
1.19
900286--900346
21
3.0
20
81
11
70
59
0
3
37
1.14
901145--901227
36
2.2
39
83
8
102
46
0
0
53
1.00
901429--901518
36
2.7
32
81
10
99
61
0
0
38
0.96
902495--902532
18
2.1
18
85
9
51
65
0
0
34
0.93
907081--907124
2
22.5
2
84
13
56
52
2
0
45
1.13
907486--907522
11
3.5
11
96
3
67
37
10
0
51
1.37
910557--910666
28
3.9
28
75
15
84
60
0
0
40
0.97
910556--910660
47
2.2
47
83
8
133
60
0
0
40
0.97
910557--910666
55
1.9
58
85
5
154
60
0
0
40
0.97
910858--910900
5
8.4
5
85
10
52
67
0
0
32
0.91
910854--910902
6
8.2
6
82
13
57
65
0
0
34
0.93
910854--910902
11
4.6
11
78
16
59
65
0
0
34
0.93
910854--910901
22
2.3
20
89
7
69
66
0
0
33
0.92
910942--910974
17
1.9
17
93
0
57
42
0
0
57
0.98
912222--912261
20
2.0
20
95
0
71
32
20
12
35
1.90
914163--914203
19
2.2
19
86
4
57
65
4
19
9
1.40

Tables:   1   2   3   4   5   6   7   8

The End!