Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007807.1 Hibiscus syriacus cultivar Beakdansim tig00110126_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2195110

Tables:   1   2   3   4   5   6   7   8   9   

This is table  9  of  9  ( 993 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2091898--2091944
24
2.0
24
83
8
60
8
21
17
53
1.70
2096727--2096834
35
3.1
35
97
0
198
20
16
29
33
1.95
2103946--2103998
23
2.3
23
90
6
81
9
13
13
64
1.50
2105467--2105518
21
2.6
21
90
6
81
34
13
5
46
1.67
2106235--2106289
11
5.3
11
80
12
71
80
0
20
0
0.72
2106240--2106282
8
5.6
8
83
10
63
79
0
20
0
0.74
2106217--2106289
22
3.4
21
79
12
87
79
1
19
0
0.81
2106223--2106289
33
2.0
33
88
5
100
79
1
19
0
0.82
2106218--2106289
27
2.6
27
83
14
78
79
1
19
0
0.81
2109388--2109439
21
2.6
21
90
6
81
34
13
5
46
1.67
2115778--2115835
17
3.4
17
80
4
62
39
10
13
36
1.79
2115791--2115834
18
2.5
18
85
10
56
43
11
9
36
1.72
2118777--2118930
17
8.9
17
81
2
146
40
7
14
37
1.74
2118780--2118930
52
2.9
52
77
2
151
40
7
14
37
1.74
2122483--2122534
20
2.6
22
82
14
60
61
1
13
23
1.42
2130204--2130273
13
5.5
12
79
17
79
1
18
2
77
0.97
2130216--2130278
8
7.9
8
76
18
60
1
19
3
76
1.01
2130214--2130271
31
1.9
30
86
10
82
1
18
3
75
1.03
2130203--2130279
31
2.6
30
77
18
81
1
19
2
76
0.97
2134789--2134818
13
2.4
13
94
5
53
26
30
0
43
1.55
2140892--2140943
7
7.3
7
82
18
63
1
13
1
82
0.84
2141612--2141640
3
9.7
3
100
0
58
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2145146--2145208
31
2.0
31
100
0
126
19
22
15
42
1.88
2147691--2147742
19
2.6
20
87
6
70
46
5
13
34
1.67
2150622--2150672
15
3.4
15
71
28
54
62
0
25
11
1.29
2150621--2150690
30
2.3
30
97
0
131
61
0
27
11
1.30
2150819--2150876
28
2.2
26
81
12
64
8
20
3
67
1.33
2150909--2150950
21
2.0
21
85
0
57
0
14
7
78
0.95
2153548--2153621
30
2.4
30
93
2
121
41
9
14
33
1.79
2162569--2162633
27
2.3
29
86
7
89
9
12
10
67
1.42
2172591--2172640
14
3.9
13
73
21
52
78
2
20
0
0.86
2172585--2172640
19
3.1
18
82
17
71
78
1
19
0
0.84
2172585--2172640
11
4.7
11
74
21
51
78
1
19
0
0.84

Tables:   1   2   3   4   5   6   7   8   9

The End!