Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008310.1 Hibiscus syriacus cultivar Beakdansim tig00111000_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3887810

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   

This is table  15  of  15  ( 1695 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3847286--3847320
8
4.5
8
92
7
63
0
0
11
88
0.51
3847286--3847322
7
5.0
7
96
3
56
0
0
13
86
0.57
3847286--3847320
15
2.2
16
95
5
63
0
0
11
88
0.51
3848105--3848146
14
2.9
15
75
10
52
71
0
9
19
1.13
3856144--3856187
17
2.5
17
88
3
61
70
0
6
22
1.11
3856813--3856874
32
1.9
32
84
12
83
62
9
0
27
1.26
3858520--3858563
17
2.5
17
88
3
61
70
0
6
22
1.11
3859187--3859248
32
1.9
32
84
12
83
62
9
0
27
1.26
3863151--3863204
3
18.0
3
88
11
76
29
0
1
68
1.00
3869147--3869246
3
33.0
3
97
2
191
34
0
0
66
0.92
3870116--3870213
32
3.1
32
80
7
110
37
13
16
32
1.87
3870116--3870210
47
2.0
47
85
4
129
36
12
16
33
1.87
3877407--3877447
18
2.3
18
91
0
64
58
0
2
39
1.11
3881163--3881212
20
2.5
20
80
6
57
26
30
18
26
1.98
3883936--3884391
116
3.9
115
79
4
459
41
15
18
25
1.89

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15

The End!