Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008353.1 Hibiscus syriacus cultivar Beakdansim tig00111088_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2583621

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   

This is table  13  of  13  ( 1447 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2552721--2552862
36
3.9
36
74
10
121
34
18
9
38
1.82
2556489--2556560
24
3.3
23
73
23
75
47
2
0
50
1.15
2556489--2556564
21
3.5
21
71
21
68
48
2
0
48
1.15
2557956--2558030
35
2.1
35
90
0
114
33
28
28
10
1.90
2558112--2558193
24
3.7
23
78
15
91
37
20
17
24
1.93
2560509--2560533
12
2.1
12
100
0
50
16
24
40
20
1.91
2575056--2575087
2
16.0
2
100
0
64
50
0
50
0
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13

The End!