Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold128
Parameters: 2 7 7 80 10 50 1000
Length:  1835488

Tables:   1   2   3   4   5   6   7   8   9   10   11   

This is table  11  of  11  ( 1217 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1814583--1814637
20
2.8
20
85
0
83
23
18
9
49
1.76
1814604--1814740
50
2.7
50
84
6
161
25
19
11
43
1.85
1817097--1817538
79
5.6
78
76
7
340
29
24
11
34
1.90
1817097--1817538
157
2.8
157
82
3
496
29
24
11
34
1.90
1817097--1817538
236
1.9
236
79
1
510
29
24
11
34
1.90
1817475--1817589
51
2.3
50
84
3
149
27
24
12
35
1.91
1817523--1817676
79
1.9
79
85
5
213
27
23
14
34
1.93
1817523--1817713
79
2.4
76
79
10
195
28
23
14
34
1.93
1819351--1819501
20
7.0
20
74
18
115
30
17
10
41
1.84
1819333--1819562
91
2.5
90
85
3
300
30
17
11
40
1.85
1822305--1822332
9
3.1
9
100
0
56
53
21
14
10
1.70
1827966--1835278
27
268.3
27
77
7
5442
25
30
14
28
1.95
1829985--1830168
88
2.1
88
84
5
237
26
30
13
29
1.94
1835132--1835233
28
3.7
27
78
15
102
26
31
9
32
1.89
1835303--1835441
27
5.0
27
76
8
145
28
14
30
27
1.95
1835304--1835477
55
3.2
53
77
11
138
27
14
29
28
1.96
1835304--1835482
27
6.6
26
74
9
117
26
15
30
28
1.96

Tables:   1   2   3   4   5   6   7   8   9   10   11

The End!