Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold150
Parameters: 2 7 7 80 10 50 1000
Length:  1465027

Tables:   1   2   3   4   5   6   7   8   9   

This is table  9  of  9  ( 977 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1427827--1427892
20
3.7
20
73
26
83
34
18
12
34
1.88
1429017--1429070
20
2.7
20
91
5
83
37
18
12
31
1.89
1431626--1431652
13
2.1
13
100
0
54
40
14
14
29
1.86
1437812--1437865
20
2.7
20
88
5
74
37
16
12
33
1.87
1440298--1440336
20
2.0
20
85
5
53
38
23
0
38
1.55
1441627--1441693
33
2.0
33
82
0
80
23
29
17
28
1.97
1442585--1442657
20
3.7
19
87
7
85
28
16
16
38
1.90
1446080--1446130
22
2.3
22
76
6
59
5
15
31
47
1.70
1446177--1446283
42
2.6
42
91
4
175
4
14
36
44
1.65
1446369--1446413
23
2.0
22
86
4
63
2
24
4
68
1.19
1446432--1446527
27
3.6
27
94
0
165
15
21
8
54
1.68
1447483--1448474
42
23.6
42
73
8
500
40
16
25
17
1.90
1449951--1449975
12
2.1
12
100
0
50
24
12
0
64
1.27
1453249--1453310
19
3.0
21
81
11
67
38
12
12
35
1.82
1453259--1453310
19
2.6
21
90
6
81
38
13
15
32
1.86
1455742--1455979
51
4.6
53
78
7
238
30
25
11
33
1.91
1455742--1455979
103
2.3
103
85
2
300
30
25
11
33
1.91

Tables:   1   2   3   4   5   6   7   8   9

The End!